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Volume 2,Issue 2

Fall 2024

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28 June 2024

Bioinformatics-Based Identification of Key Metabolic Genes in Breast Cancer and Survival Prognosis Analysis

Yehao Luo1 Xiusong Tang1 Donghan Xu2 Ting Lyu3 Xianghua You4 Yuzhou Pang1 Renfeng Li5*
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1 School of Zhuang Medicine, Guangxi University of Chinese Medicine, Nanning 530200, Guangxi Province, China
2 Faculty of Chinese Medicine, Macau University of Science and Technology, Macau 999078, China
3 Hubei Minzu University, Enshi 445000, Hubei Province, China
4 Zhuhai Integrated Traditional Chinese and Western Medicine Hospital, Zhuhai 519000, Guangdong Province, China
5 The First Affiliated Hospital of Guangxi University of Chinese Medicine, Nanning 530023, Guangxi Province, China
BDAH 2024 , 2(1), 13–24; https://doi.org/10.10086/amcmr.v1i11.78
© 2024 by the Author(s). Licensee Whioce Publishing, USA. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution 4.0 International License ( https://creativecommons.org/licenses/by/4.0/ )
Abstract

Objective: To analyze key metabolic genes in breast cancer using bioinformatics methods and conduct survival prognosis analysis. Methods: Transcriptome data for breast cancer was obtained from the Cancer Genome Atlas (TCGA) database. Relevant metabolic genes were identified using the GSEA database and matched with genes in the TCGA database to determine the final metabolic genes. The Lasso model was constructed to obtain survival prognosis analysis results. Results: Three metabolic genes related to breast cancer were identified: POLR2KNMNAT2, and SUCLA2. Survival analysis showed that the maximum survival time for both the high-risk and low-risk groups was 24 years. Age, status, and tumor stage were identified as independent prognostic factors. Conclusion: The POLR2K gene is the most significantly overexpressed and shows a preliminary correlation with the occurrence, development, and prognosis of breast cancer. However, further experimental validation is needed to confirm these findings.

Keywords
Bioinformatics
Breast cancer
Metabolic genes
Survival analysis
Prognosis
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Conflict of interest
The authors declare no conflict of interest.
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